Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899190.1_cds_XP_016449155.1_43738
CDS Infomation

[gene=LOC107774192] [db_xref=GeneID:107774192] [protein=probable acyl-activating enzyme 1, peroxisomal] [protein_id=XP_016449155.1] [location=join(9959..10369,11527..12328,12517..13145)] [gbkey=CDS]
Sequence

ATGAGTCTCTCTTCCACCATCAACATGAGTCACTTTTTCAAGGACTCAAGATTGGGTGGA
TGGTTCTTTAATGGTTCTAATCAAGCTCACTTTTCATGCACTACGACCAGTGGCGTAGCC
AAAATTTTTCCTAAGACATTGAAGATGTCTAAGAGGTTGTGCCAGCTTTCTGGGGATCAT
GATCGTCAAGTTTCTGAGCCATGGGCATCCGTGGAGGGTATGATCAAATGTGATGCAAAT
TATGTTCCATTGACACCCATTAGTTTCTTGGAGAGAGCAGCTAATGTTTTTAGTGATAGA
ACTTCAGTTATCTATGGTTCCTCTGTGACGTACACTTGGGAAGAGACCTATGCTAGGTGT
ATAAAGCTTGCTTCTGCTTTGGTTCAGTTGGGGATTTCTCGTGGTGATGTGGTTGCAACA
CTAGCCCCTAATGTTCCAGCAATGCAAGAGCTGCATTTTGCAGTACCAATGGCTGGAGCA
ATTCTTTGTACATTAAACACACGACTTGATTCAGCTATGATATCAACACTGCTAATTCAT
TCAGAAGCAAAAGTCATATTTGTGGATCAACAGTTGCTCCAACTTGCTCAAGGAGCAATA
TCTCTTCTTGCTATCAAGAAAACACAACCACCTCTTCTTGTTGTAATCTCTGAAAAATCT
AAGAATATTGACAACTCTAACACTTATGAATATGAAAGTCTCCTCAAAAGTGGCCATAGT
GATTTTTCTATAAGGTGGCCAATAAGTGAATTTGACCCTATTAGCATTAACTATACTTCT
GGAACAACATCAGGTCCTAAAGGAGTTGTTTACAGTCATAGAGGTGCATATCTCAATTCT
ATTGCCACATTTTTGCTTCATGAGATGAGTTCATTACCTATTTATCTTTGGACTGTTCCA
ACATTTCACTGCAACGGATGGTGCCTCATTTGGGGTCTAGCAGCATTTGGTGGCACTAAT
GTTTGTCTAAGACATGTATCTGCAAAAGAAATATTTGAAAGTATTTCATTGTACAATGTG
ACATATATGGGAGGGGCACCTACTGTCTTGAACATGATAGTGAATTCGTCGCCGCGTGAC
CGGAAGCCACTTCCACACAAGGTTAAGATTATGACAGGGGGTTCACCACCACCTCCACAA
ATCCTTTCCAGAATGGAGGAGTTGGGATTTGGAGTAAATCACTTATATGGACTAACAGAG
ACATATGGTCCAGGTATATATTGCTTGTGGAAGCCTGAGTGGGATTCTTTGCCTCCAGAT
GAAAGATTTACGCTGAAAGCAAGACAAGGAGTGCAACATCTTTGTTTAGAGGAAGTTGAT
GTAAGAGATTCTGCCACCATGGAGAAGGTGCCCGCGGATGGTGTAACAATGGGAGAAGTT
ATGTTTAGAGCAAATACAGTAATGAGTGGTTATTGGAAAGATGTCAAAGCAACAGAAGAA
GCTTTTAGAGGTGGACGGTTTCATAGTGGTGATCTTGCTGTTAAACATCCTGATGGTTAT
ATAGACATTAAGGATCGGTTAAAAGACATCATAATCTCTGGTGGAGAAAATATAAGCACA
GTTGAGGTGGAAAGAGCTCTGTATAGACATCCAGCAGTGTTTGAAGCAGCAGTAGTCGCA
CGACCAGATAACCACTGGGGACAGACACCTTGTGCATTTGTGAAGTTGAAGGAGGGATTT
GATGTTAGTGATAAAGAAATTATCAACTTCTGCAGGGATAATTTGCCTCATTACATGGCA
CCCCGGACAGTAATATTTCAAGATCTCCCCAAAACAACAACTGGAAAGATACAGAAATTT
ATCCTAAAGGAGAAAGCAAAAGCCTTGGGCAGTCTTTTCTGA

Peptide Sequence

PEP ID

XP_016449155.1
PEP Infomation

PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Nicotiana tabacum]
Sequence

MSLSSTINMSHFFKDSRLGGWFFNGSNQAHFSCTTTSGVAKIFPKTLKMSKRLCQLSGDH
DRQVSEPWASVEGMIKCDANYVPLTPISFLERAANVFSDRTSVIYGSSVTYTWEETYARC
IKLASALVQLGISRGDVVATLAPNVPAMQELHFAVPMAGAILCTLNTRLDSAMISTLLIH
SEAKVIFVDQQLLQLAQGAISLLAIKKTQPPLLVVISEKSKNIDNSNTYEYESLLKSGHS
DFSIRWPISEFDPISINYTSGTTSGPKGVVYSHRGAYLNSIATFLLHEMSSLPIYLWTVP
TFHCNGWCLIWGLAAFGGTNVCLRHVSAKEIFESISLYNVTYMGGAPTVLNMIVNSSPRD
RKPLPHKVKIMTGGSPPPPQILSRMEELGFGVNHLYGLTETYGPGIYCLWKPEWDSLPPD
ERFTLKARQGVQHLCLEEVDVRDSATMEKVPADGVTMGEVMFRANTVMSGYWKDVKATEE
AFRGGRFHSGDLAVKHPDGYIDIKDRLKDIIISGGENISTVEVERALYRHPAVFEAAVVA
RPDNHWGQTPCAFVKLKEGFDVSDKEIINFCRDNLPHYMAPRTVIFQDLPKTTTGKIQKF
ILKEKAKALGSLF

Transcript Sequence

Gene sequence data has not been registered.